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Introduction to Reproducibility in Cancer Informatics 

  • Offered byCoursera
  • Public/Government Institute

Introduction to Reproducibility in Cancer Informatics
 at 
Coursera 
Overview

Duration

7 hours

Total fee

Free

Mode of learning

Online

Official Website

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Credential

Certificate

Introduction to Reproducibility in Cancer Informatics
Table of content
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  • Overview
  • Highlights
  • Course Details
  • Curriculum

Introduction to Reproducibility in Cancer Informatics
 at 
Coursera 
Highlights

  • Flexible deadlines in accordance to your schedule.
  • Earn a Certificate upon completion
Details Icon

Introduction to Reproducibility in Cancer Informatics
 at 
Coursera 
Course details

Skills you will learn
More about this course
  • The course is intended for students in the biomedical sciences and researchers who use informatics tools in their research and have not had training in reproducibility tools and methods.
  • Equipping researchers with the skills to create reproducible data analyses increases the efficiency of everyone involved. Reproducible analyses are more likely to be understood, applied, and replicated by others. This helps expedite the scientific process by helping researchers avoid false positive dead ends. Open source clarity in reproducible methods also saves researchers' time so they don't have to reinvent the proverbial wheel for methods that everyone in the field is already performing.
  • This course introduces the concepts of reproducibility and replicability in the context of cancer informatics. It uses hands-on exercises to demonstrate in practical terms how to increase the reproducibility of data analyses. The course also introduces tools relevant to reproducibility including analysis notebooks, package managers, git and GitHub.
  • The course includes hands-on exercises for how to apply reproducible code concepts to their code. Individuals who take this course are encouraged to complete these activities as they follow along with the course material to help increase the reproducibility of their analyses.
  • Equip learners with reproducibility skills they can apply to their existing analyses scripts and projects. This course opts for an "ease into it" approach. We attempt to give learners doable, incremental steps to increase the reproducibility of their analyses.
  • This course is designed with busy professional learners in mind -- who may have to pick up and put down the course when their schedule allows.
Read more

Introduction to Reproducibility in Cancer Informatics
 at 
Coursera 
Curriculum

Introduction to this Course

Defining Reproducibility

Organizing your project

Using notebooks

Using notebooks

Making your project open source with GitHub

Managing package versions

Managing package versions

Writing durable code

Writing durable code

Code review

Code review

Documenting Analyses

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Introduction to Reproducibility in Cancer Informatics
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