

Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R
- Offered byFutureLearn
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R at FutureLearn Overview
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R
at FutureLearn
Duration | 3 weeks |
Mode of learning | Online |
Official Website | Go to Website |
Credential | Certificate |
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R at FutureLearn Highlights
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R
at FutureLearn
- Duration 3 weeks
- Weekly study 5 hours
- Digital upgrade Free
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R at FutureLearn Course details
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R
at FutureLearn
Skills you will learn
More about this course
- Bioinformatics is a rapidly growing academic field, and one that promises to change how we analyze and compare biological data.
- On this course, you'll get familiar with Linux the operating system often used to access and analyze biological data. You'll come away able to navigate it using the command line, understanding how to write scripts and prepare data files for further analysis and visualization.
- Much bioinformatics software is available for use through Linux, via the command line, which many biologists are unfamiliar with.
- Alongside international team of bioinformaticians, you'll learn what the main features of Linux are, and how it's used in biology. You'll be able to describe how a Linux file system is structured and learn how to use Linux commands to navigate the file system.
- You'll use Linux commands to manipulate biological data files, preparing them for export into other environments for further analysis. The course will introduce you to the basics of R language and RStudio software environment.
- You'll also learn the basics of writing and executing simple Bash scripts in order to automate data processing.
- The Welcome Genome Campus (WGC) is one of the globe's leading bioinformatics centers, pioneering vital research into genome analysis.
- On this course, the educators from WGC Advanced Courses and Scientific Conferences are joined by experts from the Institut Pasteur de Tunis, to give you practical training using real biological data in different biological scenarios. This will help you see how you can work with data in your own field of biology.
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R at FutureLearn Curriculum
Bioinformatics for Biologists: An Introduction to Linux, Bash Scripting, and R
at FutureLearn
Introduction to Linux for biologists
Introduction
Introduction to Linux
Linux File System and Text Editing
File content manipulation and processing
Introduction to environment variables and sample software installation
End of Week 1
Introduction to Bash scripting
Introduction to Week 2
Writing Bash scripts Variables and Arrays
Capturing user input
Conditional expressions
Control flow in bash and Bash functions
Writing Bash scripts - Good practices
Summary of Week 2
Plotting in R for biological scenarios
Introduction to Week 3
Introduction to R
Working with data structures in R
Working with data and simple plots in R
Working with RStudio
Summary of Week 3
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